Search results for key=SMA2020 : 1 match found.

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  • @article{SMA2020,
    	vgclass =	{refpap},
    	author =	{Squire, David McG.\ and Motyer, Allan and Ahn, Richard and Nititham, Joanne and Huang, Zhi-Ming and Oksenberg, Jorge R.\ and Foerster, John and Liao, Wilson and Leslie, Stephen},
    	title =	{{MHC*IMP} -- Imputation of Alleles for Genes in the Major Histocompatibility Complex},
    	journal =	{bio{R}xiv},
    	year =	{2020},
    	note =	{(preprint)},
    	doi =	{},
    	abstract =	{We report the development of MHC*IMP, a method for imputing
      non-classical HLA and other genes in the human Major Histocompatibility
      Complex (MHC). We created a reference panel for 25 genes in the MHC using
      allele calls from Whole Genome Sequencing data, combined with SNP data
      for the same individuals. We used this to construct an allele imputation
      model, MHC*IMP, for each gene. Cross-validation showed that MHC*IMP
      performs very well, with allele prediction accuracy 93\% or greater for
      all but two of the genes, and greater than 95\% for all but four.},